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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884553.1_cds_XP_016438872.1_34491
CDS Infomation

[gene=LOC107764788] [db_xref=GeneID:107764788] [protein=probable pectate lyase 18] [protein_id=XP_016438872.1] [location=complement(join(8495..8719,8827..8965,9694..10434,10637..10755))] [gbkey=CDS]
Sequence

ATGGCCACTCTCTCTCTTTCTTTCCTCTTCCTCTTGTCTTCCCTTCTCCTTCTCCCGTCC
CTCTTTGCCTCCTCCTCTCCCCTATCTAATCCTCAAGCTGTTGTAGATGAAGTACATAGG
AGCGTAAATGCTTCGAGAAGGAACTTAGGCTATCTTTCTTGTGGTACCGGAAATCCTATT
GATGATTGCTGGCGTTGTGATCCGAACTGGGAGAAGAACCGCCAACGGTTAGCTGATTGC
GCCATTGGCTTTGGCAAAAACGCCATTGGCGGTAGGGATGGTAAAATTTACGTGGTCACC
GACTCAGGTGACGACGATCCTGTCAACCCAAAGCCAGGGACTCTCCGTCATGCCGTTATC
CAAACTGAACCGTTGTGGATAATTTTTGCTAGGGATATGGTAATCCAATTAAAAGAAGAA
CTTATTATGAACTCATTCAAAACAATTGATGGTAGAGGTGCGAGTGTACACATTGCGGGC
GGTCCATGTATAACAATACAGTACGTAACGAATATTATTATACATGGAATACACGTACAT
GATTGTAAGCAAGGAGGGAATGCTATGGTGCGGAGCTCCCCATCGCACTACGGGTGGAGA
ACTATTTCAGATGGTGATGGAGTGTCGATATTTGGTGGGAGCCATGTTTGGGTGGACCAT
TGCTCTTTGTCCAACTGCAAAGACGGCTTGATTGACGCCATTATGGGGTCCACAGCTATT
ACAATTTCTAATAATTTCATGACTCACCATGATAAAGTTATGCTCTTGGGACATAGTGAT
TCATATGTTCAAGACAAGAATATGCAAGTTACCATTGCTTTCAATCACTTTGGGGAAGGC
CTTGTCCAACGAATGCCAAGATGTAGACATGGTTATTTCCATGTGGTGAACAATGACTAC
ACCCATTGGGAAATGTATGCAATTGGTGGAAGTGCTAGTCCCACCATCAATAGCCAAGGG
AACAGATTTCTTGCCCCTGATATTAGGTTTAGCAAAGAGGTAACAAAACATGAGGATGCT
CCAGAGAGTGAATGGAAGAATTGGAATTGGAGGACAGAGGGGGATTTAATGTTAAACGGT
GCATATTTCACACAATCAGGAGCTGGAGCCAAATCATCAAGTTATGCTAAGGCTTCAAGT
TTAAGTGCAAGGCCTTCTTCTTTGGTCAGCAATTTAGTATCTGGTTCTGGCGCTCTCAAT
TGCCGAAAGGGTTCTCGTTGCTGA

Peptide Sequence

PEP ID

XP_016438872.1
PEP Infomation

PREDICTED: probable pectate lyase 18 [Nicotiana tabacum]
Sequence

MATLSLSFLFLLSSLLLLPSLFASSSPLSNPQAVVDEVHRSVNASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVI
QTEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHVH
DCKQGGNAMVRSSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIMGSTAI
TISNNFMTHHDKVMLLGHSDSYVQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTEGDLMLNG
AYFTQSGAGAKSSSYAKASSLSARPSSLVSNLVSGSGALNCRKGSRC

Transcript Sequence

Gene sequence data has not been registered.